Welcome to AMDirT’s documentation!

🛠️ AMDirT: AncientMetagenomeDir Toolkit 🛠️

AMDirT is a toolkit for interacting with the AncientMetagenomeDir metadata repository of ancient metagenomic samples and ancient microbial genomes. This tool provides ways to validate AncientMetagenomeDir submissions, explore and download sequencing data for ancient microbial and environmental (meta)genomes, and automatically prepare input samplesheets for a range of bioinformatic processing pipelines.

For more information on installation see: AMDirT. For how to use the toolkit (tutorials, how-toes, references) please see the table of contents.

Contents:

• AMDirT
• Tutorials
• How Tos
• Quick Reference
• Python API